Science, Open Source, and Intellectual Property.
And to top it off, the level of distrust all this will bring up(ignoring Fox News, I'm talking about the rest of the press, if they even notice...) reminded me of this subversive reactionary blogger I read who is discussing an "Antiversity" and how it could create a coup against democracy(uh, the guy is seriously not a fan of it): The Dire Problem and the Virtual Option, and more here and here).
Anyway, all this is an excuse to ramble about some of my "crazier" leanings. A lot of people have compared good science to open source. I actually think that's a good comparison, and this whole incident will bring up how good open source differs from bad, and how that applies to science. The best open source is done in the open: public mailing lists, blogs, public version control repositories with the complete history of the project.
To quote one of my favorite movies, its run under the rule: "No More Secrets".
Of course, a lot of projects and science are not run like this. Some of it is just human nature, after all, people fear looking like idiots if they show their works-in-progress to the world, others worry about getting scooped on things sitting right under the noses, and finally: Greed.
Untangling the greed aspect is hard, because there are so many tentacles to it: Researchers in fields with lucrative industry ties want to get rich from their research. Universities wanting to claim faculty work and even more questionable, student work(why is this more questionable? Plenty of students PAY the school to learn, at least the faculty have a salary and a formal contract regarding this stuff...).
Even worse, and this relates to my personal pacifism and complete hatred of the Military-Industrial complex: The way the government corrupts research and morality with its grant giving process. When I was still on an academic trajectory, I heard plenty of people point out that I was retarded for being completely, emphatically opposed to taking military money. And this included pacifists. The problem, of course, is that this sort of casual attitude promotes a laxness in standards and judgment, and undermines the connection between personal morality and your work.
Now, scientists should be objective, so we could argue about my desire to connect morality and ethics to the process of science. But scientists are also people, and ultimately, the scientific process is a commitment to a set of ethics and morality(if scientists should not be concerned with morality, let me invoke Godwin's law and ask about all those interesting experiments on human test subjects the Nazi's performed?)
Of course, another affront I have is that public money funds a good amount of research in this country. Now, I have suggested that good science, like good open source is performed out in the open, furthermore, computers are quite amazing at storing large amounts of data easily, so why, in this day and age, would we be concerned about not having, capturing, storing, and publicly archiving every "artifact" produced by a research team? Furthermore, why do my tax dollars fund public research which is quite frequently handed off to private hands for development, without ever having a full disclosure of the record of the research? There is even a constitutional question here, since the US federal government is not permitted to exercise copyright on anything it produces. Of course, contractors WORKING for the government can have copyrights? Legally it all makes sense, logically, however, it does not(at least that's my claim).
Now, some might argue science would look radically different if the sort of stuff I mentioned here was even partially implemented. Yep, that's my point. Good science is done in the open. Intellectual property is frequently about keeping everyone else in the dark. That's what we would call a conflict of interest. And regarding all those sweet deals between government funded research and private hands? I don't really see how its that different that other forms of corruption. I may be a serious capitalist, but I strongly believe in the value of public goods and science is one of the ultimate public goods.

